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  5. Sopen04g028730

Sopen04g028730


Description : mTERF


Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g028730
Cluster HCCA clusters: Cluster_281

Target Alias Description ECC score Gene Family Method Actions
At1g62490 No alias Mitochondrial transcription termination factor family... 0.02 Orthogroups_2024-Update
Bradi1g16160 No alias Mitochondrial transcription termination factor family protein 0.02 Orthogroups_2024-Update
Bradi4g23197 No alias Mitochondrial transcription termination factor family protein 0.03 Orthogroups_2024-Update
Brara.F01783.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I01182.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.08G306100 No alias Mitochondrial transcription termination factor family protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G024310.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G116050.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G075340.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G040960.3 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os05g34160 No alias mTERF domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g24090 No alias mTERF domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10436083g0040 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00000444-RA No alias (at1g79220 : 82.4) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
PSME_00056620-RA No alias (at1g79220 : 139.0) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
Seita.4G092000.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
Seita.4G094400.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
Seita.4G095000.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G179800.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G131550.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003690 MTERF 82 293
IPR003690 MTERF 253 357
No external refs found!