Sopen04g029010

Description : Glycosyl hydrolase family 3 N terminal domain

Gene families : OG_42_0000397 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen04g029010
Cluster	HCCA clusters: Cluster_198

Target	Alias	Description	ECC score	Gene Family Method
Bradi5g23470	No alias	beta-D-xylosidase 4	0.02	Orthogroups_2024-Update
PSME_00023147-RA	No alias	(at5g64570 : 870.0) Encodes a beta-d-xylosidase that...	0.03	Orthogroups_2024-Update
Potri.001G206800	No alias	beta-D-xylosidase 4	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR026891	Fn3-like	702	769
IPR001764	Glyco_hydro_3_N	110	364
IPR002772	Glyco_hydro_3_C	407	635

External Links

No external refs found!