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  5. Sopen04g029080

Sopen04g029080


Description : AP2 domain


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g029080
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
A4A49_17723 No alias ethylene-responsive transcription factor 1 0.03 Orthogroups_2024-Update
A4A49_27754 No alias ethylene-responsive transcription factor 1a 0.02 Orthogroups_2024-Update
At3g50260 No alias Ethylene-responsive transcription factor ERF011... 0.02 Orthogroups_2024-Update
Bradi1g33550 No alias ethylene responsive element binding factor 4 0.02 Orthogroups_2024-Update
Bradi1g71740 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Brara.G03313.1 No alias subgroup ERF-II transcription factor *(ERF16/17/18) 0.02 Orthogroups_2024-Update
GRMZM2G003466 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G138396 No alias redox responsive transcription factor 1 0.02 Orthogroups_2024-Update
Glyma.05G214400 No alias cytokinin response factor 2 0.02 Orthogroups_2024-Update
Glyma.06G301300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G004200 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G046300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G018720.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.02 Orthogroups_2024-Update
MA_28894g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00056166-RA No alias (at5g11590 : 103.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Potri.001G157100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.002G039300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Sobic.002G350500.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.02 Orthogroups_2024-Update
Sobic.006G184700.1 No alias subgroup ERF-III transcription factor 0.01 Orthogroups_2024-Update
Solyc03g093540 No alias Ethylene-responsive transcription factor 5 (AHRD V3.3... 0.06 Orthogroups_2024-Update
Solyc03g093550 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc03g093560 No alias ethylene response factor C.6 0.03 Orthogroups_2024-Update
Solyc03g118190 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Solyc03g124110 No alias CBF 0.03 Orthogroups_2024-Update
Solyc04g012050 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Solyc05g052410 No alias Dehydration responsive element binding protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc12g049560 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 185 233
No external refs found!