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  5. Sopen04g029860

Sopen04g029860


Description : Ribosomal protein S21e


Gene families : OG_42_0002517 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g029860
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
271040 No alias Ribosomal protein S21e 0.03 Orthogroups_2024-Update
At5g27700 No alias 40S ribosomal protein S21... 0.03 Orthogroups_2024-Update
Brara.I03670.1 No alias component *(eS21) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
GRMZM2G093574 No alias Ribosomal protein S21e 0.03 Orthogroups_2024-Update
Glyma.15G147700 No alias Ribosomal protein S21e 0.03 Orthogroups_2024-Update
Kfl00268_0170 kfl00268_0170_v1.1 (p35687|rs21_orysa : 140.0) 40S ribosomal protein S21 -... 0.02 Orthogroups_2024-Update
PSME_00047574-RA No alias (at5g27700 : 115.0) Ribosomal protein S21e ; FUNCTIONS... 0.03 Orthogroups_2024-Update
Pp1s372_10V6 No alias 40s ribosomal protein 0.02 Orthogroups_2024-Update
Pp1s73_165V6 No alias 40s ribosomal protein 0.02 Orthogroups_2024-Update
Seita.9G131800.1 No alias component *(eS21) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Sobic.001G130301.1 No alias component *(eS21) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Solyc01g066840 No alias 40S ribosomal protein S21 (AHRD V3.3 *** A0A0V0GU27_SOLCH) 0.04 Orthogroups_2024-Update
Solyc04g074910 No alias 40S ribosomal protein S21 (AHRD V3.3 *** M0ZPV5_SOLTU) 0.03 Orthogroups_2024-Update
evm.model.contig_2342.3 No alias (p35687|rs21_orysa : 96.3) 40S ribosomal protein S21 -... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001931 Ribosomal_S21e 1 76
No external refs found!