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  5. Sopen04g030100

Sopen04g030100


Description : Mechanosensitive ion channel


Gene families : OG_42_0000878 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000878_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g030100
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Brara.A02293.1 No alias mechanosensitive ion channel *(MSL) 0.04 Orthogroups_2024-Update
Glyma.01G023200 No alias MSCS-like 2 0.03 Orthogroups_2024-Update
Kfl00238_0160 kfl00238_0160_v1.1 (at5g10490 : 218.0) A member of MscS-like gene family,... 0.02 Orthogroups_2024-Update
LOC_Os03g31839 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Potri.002G105900 No alias MSCS-like 3 0.02 Orthogroups_2024-Update
Potri.005G106700 No alias MSCS-like 2 0.03 Orthogroups_2024-Update
Solyc04g076300 No alias Mechanosensitive ion channel protein 2, chloroplastic... 0.03 Orthogroups_2024-Update
Solyc11g010610 No alias Mechanosensitive ion channel-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006685 MscS_channel 241 448
No external refs found!