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  5. Sopen04g030340

Sopen04g030340


Description : HECT-domain (ubiquitin-transferase)


Gene families : OG_42_0001888 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g030340
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
154179 No alias ubiquitin-protein ligase 1 0.03 Orthogroups_2024-Update
Bradi4g07997 No alias ubiquitin-protein ligase 1 0.06 Orthogroups_2024-Update
Glyma.02G216000 No alias ubiquitin-protein ligase 1 0.05 Orthogroups_2024-Update
Glyma.04G096900 No alias ubiquitin-protein ligase 1 0.03 Orthogroups_2024-Update
Glyma.06G098700 No alias ubiquitin-protein ligase 1 0.03 Orthogroups_2024-Update
Glyma.08G087600 No alias ubiquitin-protein ligase 1 0.04 Orthogroups_2024-Update
Glyma.14G183000 No alias ubiquitin-protein ligase 2 0.03 Orthogroups_2024-Update
HORVU5Hr1G033930.8 No alias E3 ubiquitin ligase *(UPL1) 0.03 Orthogroups_2024-Update
LOC_Os09g07900 No alias ubiquitin-protein ligase 1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g24080 No alias HECT-domain domain containing protein, expressed 0.06 Orthogroups_2024-Update
MA_7295g0020 No alias (at1g70320 : 866.0) encodes a ubiquitin-protein... 0.03 Orthogroups_2024-Update
Mp4g21620.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.03 Orthogroups_2024-Update
Potri.001G368600 No alias ubiquitin-protein ligase 1 0.03 Orthogroups_2024-Update
Potri.002G110500 No alias ubiquitin-protein ligase 2 0.03 Orthogroups_2024-Update
Pp1s42_128V6 No alias e3 ubiquitin protein ligase 0.02 Orthogroups_2024-Update
Seita.2G152700.1 No alias E3 ubiquitin ligase *(UPL1) 0.03 Orthogroups_2024-Update
evm.model.contig_2051.21 No alias (at1g55860 : 460.0) encodes a ubiquitin-protein ligase... 0.02 Orthogroups_2024-Update
evm.model.contig_2081.3 No alias (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010309 E3_Ub_ligase_DUF908 106 410
IPR025527 DUF4414 2611 2642
IPR025527 DUF4414 2649 2680
IPR025527 DUF4414 2575 2602
IPR010314 E3_Ub_ligase_DUF913 473 806
IPR015940 UBA 1304 1341
IPR000569 HECT_dom 3345 3655
No external refs found!