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  5. Sopen04g030410

Sopen04g030410


Description : K-box region


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g030410
Cluster HCCA clusters: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
At1g22130 No alias Agamous-like MADS-box protein AGL104... 0.02 Orthogroups_2024-Update
Brara.D00221.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.G02489.1 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.03 Orthogroups_2024-Update
LOC_Os04g38780 No alias transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G328600 No alias AGAMOUS-like 8 0.03 Orthogroups_2024-Update
Potri.012G100200 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Pp1s55_304V6 No alias agamous-like protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002487 TF_Kbox 1 61
No external refs found!