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  5. Sopen04g030560

Sopen04g030560


Description : Symplekin tight junction protein C terminal


Gene families : OG_42_0002144 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002144_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g030560
Cluster HCCA clusters: Cluster_403

Target Alias Description ECC score Gene Family Method Actions
442688 No alias HEAT repeat-containing protein 0.02 Orthogroups_2024-Update
Glyma.03G057600 No alias HEAT repeat-containing protein 0.02 Orthogroups_2024-Update
PSME_00018866-RA No alias (at5g01400 : 251.0) Encodes a Symplekin/Pta1 homologue... 0.02 Orthogroups_2024-Update
Seita.5G281700.1 No alias component *(Symplekin/Pta1) of Cleavage and... 0.05 Orthogroups_2024-Update
Solyc04g076900 No alias Symplekin (AHRD V3.3 *-* A0A151SP17_CAJCA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022075 Symplekin_C 1093 1271
IPR032460 Symplekin/Pta1_N 97 316
No external refs found!