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  5. Sopen04g030750

Sopen04g030750


Description : hypothetical protein


Gene families : OG_42_0009107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g030750
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G054896 No alias plastid-specific 50S ribosomal protein 6 0.02 Orthogroups_2024-Update
Glyma.06G089700 No alias plastid-specific 50S ribosomal protein 6 0.03 Orthogroups_2024-Update
Kfl00714_0010 kfl00714_0010_v1.1 no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
LOC_Os11g34940 No alias plastid-specific 50S ribosomal protein 6, chloroplast... 0.03 Orthogroups_2024-Update
Pp1s74_226V6 No alias MVA3.3; plastid-specific ribosomal protein 6 precursor... 0.05 Orthogroups_2024-Update
Seita.8G148900.1 No alias component *(cL38) of large plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Sobic.003G246600.1 No alias component *(cL38) of large plastid ribosomal-subunit proteome 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
CC GO:0009507 chloroplast IEA InterProScan predictions
MF GO:0019843 rRNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR020526 Ribosomal_L6_chp 38 96
No external refs found!