Sopen04g031030

Description : Squalene epoxidase

Gene families : OG_42_0003060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003060_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen04g031030
Cluster	HCCA clusters: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method
150266	No alias	FAD/NAD(P)-binding oxidoreductase family protein	0.03	Orthogroups_2024-Update
At4g37760	No alias	Squalene epoxidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYH2]	0.08	Orthogroups_2024-Update
Bradi1g69170	No alias	FAD/NAD(P)-binding oxidoreductase family protein	0.05	Orthogroups_2024-Update
Brara.D01355.1	No alias	squalene epoxidase & EC_1.14 oxidoreductase acting on...	0.04	Orthogroups_2024-Update
GRMZM2G105787	No alias	FAD/NAD(P)-binding oxidoreductase family protein	0.03	Orthogroups_2024-Update
Glyma.07G185500	No alias	FAD/NAD(P)-binding oxidoreductase family protein	0.02	Orthogroups_2024-Update
Glyma.13G253100	No alias	FAD/NAD(P)-binding oxidoreductase family protein	0.06	Orthogroups_2024-Update
Glyma.14G090400	No alias	FAD/NAD(P)-binding oxidoreductase family protein	0.02	Orthogroups_2024-Update
Glyma.15G061800	No alias	FAD/NAD(P)-binding oxidoreductase family protein	0.05	Orthogroups_2024-Update
Glyma.17G232255	No alias	FAD/NAD(P)-binding oxidoreductase family protein	0.02	Orthogroups_2024-Update
LOC_Os03g12910	No alias	squalene monooxygenase, putative, expressed	0.03	Orthogroups_2024-Update
Potri.015G120900	No alias	FAD/NAD(P)-binding oxidoreductase family protein	0.02	Orthogroups_2024-Update
Solyc04g077440	No alias	Squalene monooxygenase (AHRD V3.3 *** Q506K3_DATIN)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004497	monooxygenase activity	None	Extended
MF	GO:0004506	squalene monooxygenase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	None	Extended
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0044425	membrane part	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	InterProScan predictions
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013698	Squalene_epoxidase	209	481

External Links

No external refs found!