Sopen04g031540

Description : SPOC domain

Gene families : OG_42_0006261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006261_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen04g031540
Cluster	HCCA clusters: Cluster_137

Target	Alias	Description	ECC score	Gene Family Method
MA_10431539g0010	No alias	(at1g27750 : 143.0) nucleic acid binding; FUNCTIONS IN:...	0.04	Orthogroups_2024-Update
Mp3g07560.1	No alias	no hits & (original description: none)	0.02	Orthogroups_2024-Update
PSME_00000870-RA	No alias	(at1g27750 : 341.0) nucleic acid binding; FUNCTIONS IN:...	0.04	Orthogroups_2024-Update
Seita.5G329800.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Sobic.003G307000.2	No alias	Unknown function	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR012921	SPOC_C	1202	1342
IPR000504	RRM_dom	575	632

External Links

No external refs found!