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  5. Sopen04g031900

Sopen04g031900


Description : Cyclin, N-terminal domain


Gene families : OG_42_0000120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g031900
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Brara.F03824.1 No alias regulatory protein *(CYCA) of cell cycle 0.03 Orthogroups_2024-Update
Brara.H00423.1 No alias regulatory protein *(CYCA) of cell cycle 0.05 Orthogroups_2024-Update
Glyma.04G043600 No alias Cyclin A3;1 0.05 Orthogroups_2024-Update
Glyma.04G071600 No alias mitotic-like cyclin 3B from Arabidopsis 0.04 Orthogroups_2024-Update
Glyma.06G043900 No alias CYCLIN A3;4 0.03 Orthogroups_2024-Update
Glyma.14G154200 No alias Cyclin A1;1 0.03 Orthogroups_2024-Update
Glyma.17G237200 No alias Cyclin A3;1 0.03 Orthogroups_2024-Update
Kfl00112_0070 kfl00112_0070_v1.... (at1g80370 : 326.0) Cyclin A2;4 (CYCA2;4); CONTAINS... 0.03 Orthogroups_2024-Update
LOC_Os05g14730 No alias cyclin-A1, putative, expressed 0.02 Orthogroups_2024-Update
MA_28323g0010 No alias (at5g11300 : 355.0) mitotic-like cyclin, core cell cycle... 0.04 Orthogroups_2024-Update
MA_6619g0010 No alias (at1g44110 : 409.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.03 Orthogroups_2024-Update
MA_88982g0010 No alias (at5g11300 : 380.0) mitotic-like cyclin, core cell cycle... 0.03 Orthogroups_2024-Update
Pp1s237_91V6 No alias n-terminal domain containing expressed 0.02 Orthogroups_2024-Update
Pp1s642_3V6 No alias n-terminal domain containing expressed 0.02 Orthogroups_2024-Update
Seita.5G005800.1 No alias regulatory protein *(TAM) involved in metaphase to... 0.02 Orthogroups_2024-Update
Seita.5G352700.1 No alias regulatory protein *(CYCB) of cell cycle 0.02 Orthogroups_2024-Update
Solyc04g078310 No alias cyclin A3_1 0.02 Orthogroups_2024-Update
Solyc12g088520 No alias cyclin A3_3 0.03 Orthogroups_2024-Update
Solyc12g088530 No alias cyclin A3.1 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006671 Cyclin_N 104 232
IPR004367 Cyclin_C-dom 235 357
No external refs found!