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  5. Sopen04g032530

Sopen04g032530


Description : Alpha-amylase C-terminal beta-sheet domain


Gene families : OG_42_0000605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000605_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g032530
Cluster HCCA clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Bradi5g08800 No alias alpha-amylase-like 2 0.02 Orthogroups_2024-Update
MA_30833g0020 No alias (p27933|amy3d_orysa : 533.0) Alpha-amylase isozyme 3D... 0.02 Orthogroups_2024-Update
MA_8527195g0010 No alias (at1g69830 : 135.0) Encodes a plastid-localized... 0.02 Orthogroups_2024-Update
Solyc02g066950 No alias Alpha-amylase, putative (AHRD V3.3 *** B9SJF1_RICCO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0004556 alpha-amylase activity IEA InterProScan predictions
MF GO:0005509 calcium ion binding IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 34 105
IPR012850 A-amylase_bs_C 303 361
No external refs found!