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  5. Solyc02g064960

Solyc02g064960


Description : APETALA2b


Gene families : OG_42_0000060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g064960
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
A4A49_04523 No alias floral homeotic protein apetala 2 0.04 Orthogroups_2024-Update
A4A49_10848 No alias ethylene-responsive transcription factor rap2-7 0.02 Orthogroups_2024-Update
A4A49_19373 No alias ethylene-responsive transcription factor rap2-7 0.03 Orthogroups_2024-Update
Bradi4g30617 No alias ARIA-interacting double AP2 domain protein 0.03 Orthogroups_2024-Update
Brara.G01628.1 No alias AP2-type transcription factor *(WRI/AIL) 0.02 Orthogroups_2024-Update
GRMZM5G862109 No alias related to AP2.7 0.03 Orthogroups_2024-Update
Glyma.08G220800 No alias ARIA-interacting double AP2 domain protein 0.03 Orthogroups_2024-Update
Glyma.12G056300 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.18G256000 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
HORVU4Hr1G065990.2 No alias AP2-type transcription factor *(WRI/AIL) 0.05 Orthogroups_2024-Update
Mp7g13270.1 No alias transcription factor (AP2) 0.02 Orthogroups_2024-Update
PSME_00034893-RA No alias (at3g54320 : 243.0) WRINKLED1 encodes transcription... 0.03 Orthogroups_2024-Update
PSME_00043053-RA No alias (at3g54320 : 248.0) WRINKLED1 encodes transcription... 0.02 Orthogroups_2024-Update
Potri.001G041500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G205700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.005G148400 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.008G011900 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Seita.9G426400.1 No alias AP2-type transcription factor *(WRI/AIL) 0.04 Orthogroups_2024-Update
Solyc03g044300 No alias APETALA2a 0.03 Orthogroups_2024-Update
Sopen09g002130 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 254 304
IPR001471 AP2/ERF_dom 162 211
No external refs found!