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  5. Sopen04g033250

Sopen04g033250


Description : WD domain, G-beta repeat


Gene families : OG_42_0000343 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g033250
Cluster HCCA clusters: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Brara.I03189.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I03517.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J00530.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Potri.004G148400 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.T124000 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.9G099500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g109120 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 225 261
IPR001680 WD40_repeat 190 220
IPR001680 WD40_repeat 359 405
IPR001680 WD40_repeat 319 351
No external refs found!