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  5. Sopen04g033710

Sopen04g033710


Description : Zinc finger, C2H2 type


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g033710
Cluster HCCA clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
9104 No alias indeterminate(ID)-domain 11 0.04 Orthogroups_2024-Update
A4A49_04718 No alias zinc finger protein magpie 0.03 Orthogroups_2024-Update
At1g03840 No alias Uncharacterized protein At1g03840 (Fragment)... 0.04 Orthogroups_2024-Update
At2g02070 No alias Protein indeterminate-domain 5, chloroplastic... 0.03 Orthogroups_2024-Update
At3g50700 No alias Protein indeterminate-domain 2... 0.03 Orthogroups_2024-Update
Brara.E02737.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Brara.F03436.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Brara.G02535.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Brara.I02048.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G123094 No alias C2H2-like zinc finger protein 0.02 Orthogroups_2024-Update
GRMZM2G177693 No alias indeterminate(ID)-domain 7 0.02 Orthogroups_2024-Update
GRMZM2G320287 No alias indeterminate(ID)-domain 2 0.02 Orthogroups_2024-Update
GRMZM5G884137 No alias indeterminate(ID)-domain 5 0.03 Orthogroups_2024-Update
Glyma.05G137000 No alias C2H2-like zinc finger protein 0.02 Orthogroups_2024-Update
Glyma.06G287200 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.08G056800 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.10G280000 No alias indeterminate(ID)-domain 5 0.02 Orthogroups_2024-Update
Glyma.13G349500 No alias indeterminate(ID)-domain 7 0.03 Orthogroups_2024-Update
Glyma.20G184000 No alias indeterminate(ID)-domain 4 0.03 Orthogroups_2024-Update
HORVU2Hr1G036710.3 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
HORVU4Hr1G064740.2 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
LOC_Os10g28330 No alias ZOS10-04 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
Potri.007G028800 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Potri.T034600 No alias indeterminate(ID)-domain 2 0.03 Orthogroups_2024-Update
Pp1s165_3V6 No alias nucleic acid binding 0.02 Orthogroups_2024-Update
Sobic.007G173200.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Solyc01g099340 No alias Zinc finger protein (AHRD V3.3 *** E9NZV2_PHAVU) 0.03 Orthogroups_2024-Update
Sopen03g040470 No alias Zinc finger, C2H2 type 0.03 Orthogroups_2024-Update
evm.model.contig_435.15 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 49 71
No external refs found!