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  5. Sopen04g033930

Sopen04g033930


Description : Radical SAM superfamily


Gene families : OG_42_0008662 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008662_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g033930
Cluster HCCA clusters: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
Brara.G03334.1 No alias tRNA 4-demethylwyosine synthase *(TYW1) 0.03 Orthogroups_2024-Update
Cre14.g623300 No alias flavodoxin family protein / radical SAM domain-containing protein 0.05 Orthogroups_2024-Update
Glyma.17G250400 No alias flavodoxin family protein / radical SAM domain-containing protein 0.03 Orthogroups_2024-Update
Pp1s184_72V6 No alias radical s-adenosyl methionine and flavodoxin domains 1 0.02 Orthogroups_2024-Update
Sobic.001G073150.1 No alias tRNA 4-demethylwyosine synthase *(TYW1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0010181 FMN binding IEA InterProScan predictions
MF GO:0051536 iron-sulfur cluster binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008254 Flavodoxin/NO_synth 56 197
IPR007197 rSAM 344 521
IPR013917 tRNA_wybutosine-synth 527 590
No external refs found!