Sopen04g034360

Description : 50S ribosome-binding GTPase

Gene families : OG_42_0007490 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007490_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen04g034360
Cluster	HCCA clusters: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
Seita.8G170500.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc04g080770	No alias	GTP-binding protein, HflX (AHRD V3.3 *** AT5G57960.1)	0.12	Orthogroups_2024-Update
evm.model.tig00021135.19	No alias	(at5g57960 : 225.0) GTP-binding protein, HflX; FUNCTIONS...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032305	GTP-bd_M	241	318
IPR025121	GTPase_HflX_N	149	238
IPR006073	GTP_binding_domain	326	443

External Links

No external refs found!