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  5. Solyc02g065090

Solyc02g065090


Description : Patatin (AHRD V3.3 *** K4B6U4_SOLLC)


Gene families : OG_42_0000167 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g065090
Cluster HCCA clusters: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
81931 No alias phospholipase A 2A 0.03 Orthogroups_2024-Update
A4A49_11197 No alias patatin-like protein 2 0.04 Orthogroups_2024-Update
A4A49_37692 No alias putative inactive patatin-3-kuras 1 0.03 Orthogroups_2024-Update
A4A49_62621 No alias putative inactive patatin-3-kuras 1 0.05 Orthogroups_2024-Update
Bradi3g37980 No alias phospholipase A 2A 0.03 Orthogroups_2024-Update
Bradi4g13670 No alias phospholipase A 2A 0.06 Orthogroups_2024-Update
GRMZM2G034271 No alias phospholipase A 2A 0.03 Orthogroups_2024-Update
Glyma.14G081300 No alias phospholipase A 2A 0.03 Orthogroups_2024-Update
HORVU5Hr1G119820.1 No alias phospholipase-A2 *(pPLA2-II)) 0.03 Orthogroups_2024-Update
LOC_Os08g37180 No alias patatin, putative, expressed 0.03 Orthogroups_2024-Update
MA_129875g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_84393g0010 No alias (at4g37060 : 328.0) Patatin-related phospholipase A.... 0.02 Orthogroups_2024-Update
PSME_00010349-RA No alias (at4g37060 : 404.0) Patatin-related phospholipase A.... 0.03 Orthogroups_2024-Update
PSME_00010351-RA No alias (at2g26560 : 361.0) Encodes a lipid acyl hydrolase with... 0.05 Orthogroups_2024-Update
PSME_00019322-RA No alias (at4g37050 : 322.0) Patatin-related phospholipase A.... 0.04 Orthogroups_2024-Update
PSME_00019323-RA No alias (at2g26560 : 273.0) Encodes a lipid acyl hydrolase with... 0.03 Orthogroups_2024-Update
PSME_00031696-RA No alias (at4g37050 : 288.0) Patatin-related phospholipase A.... 0.02 Orthogroups_2024-Update
PSME_00041671-RA No alias (at2g26560 : 227.0) Encodes a lipid acyl hydrolase with... 0.03 Orthogroups_2024-Update
PSME_00047147-RA No alias (at2g26560 : 202.0) Encodes a lipid acyl hydrolase with... 0.02 Orthogroups_2024-Update
Potri.002G128300 No alias phospholipase A 2A 0.03 Orthogroups_2024-Update
Potri.T096000 No alias phospholipase A 2A 0.03 Orthogroups_2024-Update
Sobic.005G186100.1 No alias phospholipase-A2 *(pPLA2-II)) 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004312 fatty acid synthase activity IEP Predicted GO
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Predicted GO
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002641 PNPLA_dom 35 240
No external refs found!