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  5. Sopen04g035100

Sopen04g035100


Description : Tubulin/FtsZ family, GTPase domain


Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g035100
Cluster HCCA clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
164404 No alias tubulin beta chain 2 0.02 Orthogroups_2024-Update
A4A49_07023 No alias tubulin beta-2 chain 0.03 Orthogroups_2024-Update
A4A49_61063 No alias tubulin beta-8 chain 0.02 Orthogroups_2024-Update
At4g20890 No alias Tubulin beta chain [Source:UniProtKB/TrEMBL;Acc:A0A178UU99] 0.04 Orthogroups_2024-Update
Brara.F03751.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Brara.H01049.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Brara.I01840.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Glyma.06G024100 No alias tubulin beta-1 chain 0.03 Orthogroups_2024-Update
Glyma.19G127700 No alias beta-6 tubulin 0.02 Orthogroups_2024-Update
LOC_Os03g01530 No alias tubulin/FtsZ domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_230579g0010 No alias (q41785|tbb8_maize : 276.0) Tubulin beta-8 chain (Beta-8... 0.02 Orthogroups_2024-Update
MA_79708g0010 No alias (p18026|tbb2_maize : 471.0) Tubulin beta-2 chain (Beta-2... 0.03 Orthogroups_2024-Update
Mp1g20730.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Mp2g09390.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Mp2g16780.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Potri.003G126800 No alias beta-6 tubulin 0.03 Orthogroups_2024-Update
Potri.006G035400 No alias beta-6 tubulin 0.04 Orthogroups_2024-Update
Potri.009G067100 No alias beta-6 tubulin 0.03 Orthogroups_2024-Update
Potri.016G033200 No alias beta-6 tubulin 0.03 Orthogroups_2024-Update
Pp1s252_101V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Pp1s252_90V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Seita.4G265500.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.04 Orthogroups_2024-Update
Seita.9G148700.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Seita.9G576600.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Solyc04g081490 No alias beta-tubulin 0.07 Orthogroups_2024-Update
Solyc10g086760 No alias Tubulin beta chain (AHRD V3.3 *** A0A103XQ61_CYNCS) 0.03 Orthogroups_2024-Update
evm.model.tig00001067.6 No alias (p04690|tbb_chlre : 752.0) Tubulin beta-1/beta-2 chain -... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 214
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 264 385
No external refs found!