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  5. Sopen04g035730

Sopen04g035730


Description : Alpha-amylase C-terminal beta-sheet domain


Gene families : OG_42_0000605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000605_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g035730
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Glyma.11G153301 No alias alpha-amylase-like 3 0.03 Orthogroups_2024-Update
Mp3g22820.1 No alias alpha amylase 0.02 Orthogroups_2024-Update
Potri.017G093200 No alias alpha-amylase-like 3 0.02 Orthogroups_2024-Update
Pp1s100_191V6 No alias at1g69830 t17f3_14 0.02 Orthogroups_2024-Update
Solyc04g078930 No alias Alpha-amylase (AHRD V3.3 *** K4BUX7_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0004556 alpha-amylase activity IEA InterProScan predictions
MF GO:0005509 calcium ion binding IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012850 A-amylase_bs_C 351 406
IPR006047 Glyco_hydro_13_cat_dom 42 298
No external refs found!