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  5. Sopen04g035950

Sopen04g035950


Description : Protein of unknown function (DUF663)


Gene families : OG_42_0006832 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006832_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g035950
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
123319 No alias Function unknown 0.03 Orthogroups_2024-Update
A4A49_08062 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At1g42440 No alias At1g42440/F7F22_7 [Source:UniProtKB/TrEMBL;Acc:Q9ASU6] 0.03 Orthogroups_2024-Update
Bradi1g41930 No alias Function unknown 0.07 Orthogroups_2024-Update
Brara.F00342.1 No alias Unknown function 0.09 Orthogroups_2024-Update
Cre16.g673700 No alias Function unknown 0.09 Orthogroups_2024-Update
Glyma.04G018100 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.06G018400 No alias Function unknown 0.05 Orthogroups_2024-Update
HORVU7Hr1G083070.5 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00278_0120 kfl00278_0120_v1.1 (at1g42440 : 386.0) FUNCTIONS IN: molecular_function... 0.07 Orthogroups_2024-Update
LOC_Os11g19250 No alias AARP2CN domain containing protein, expressed 0.03 Orthogroups_2024-Update
Mp4g14950.1 No alias no hits & (original description: none) 0.04 Orthogroups_2024-Update
PSME_00010565-RA No alias (at1g42440 : 581.0) FUNCTIONS IN: molecular_function... 0.02 Orthogroups_2024-Update
Pp1s30_137V6 No alias 20s rrna homolog 0.05 Orthogroups_2024-Update
Seita.3G041200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.009G249800.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Solyc04g082330 No alias pre-rRNA-processing TSR1-like protein (AHRD V3.3 *** AT1G42440.1) 0.19 Orthogroups_2024-Update
evm.model.contig_511.2 No alias (at1g42440 : 249.0) FUNCTIONS IN: molecular_function... 0.07 Orthogroups_2024-Update
evm.model.tig00021357.35 No alias (at1g42440 : 377.0) FUNCTIONS IN: molecular_function... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0042254 ribosome biogenesis IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012948 AARP2CN 227 306
IPR007034 BMS1_TSR1_C 484 779
No external refs found!