Sopen04g036180

Description : Cytoskeletal-regulatory complex EF hand

Gene families : OG_42_0001824 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001824_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen04g036180
Cluster	HCCA clusters: Cluster_389

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g76400	No alias	Calcium-binding EF hand family protein	0.04	Orthogroups_2024-Update
Pp1s149_18V6	No alias	calcium ion binding	0.02	Orthogroups_2024-Update
Pp1s37_348V6	No alias	F8K7.4; calcium-binding EF hand family protein...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	InterProScan predictions
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000261	EH_dom	373	461
IPR002048	EF_hand_dom	15	33

External Links

No external refs found!