Solyc02g065290

Description : Dof zinc finger protein2

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc02g065290
Cluster	HCCA clusters: Cluster_234

Target	Alias	Description	ECC score	Gene Family Method
A4A49_20555	No alias	dof zinc finger protein dof2.1	0.03	Orthogroups_2024-Update
At1g47655	No alias	Dof zinc finger protein DOF1.6...	0.04	Orthogroups_2024-Update
Brara.C01888.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.C02339.1	No alias	transcription factor *(DOF)	0.06	Orthogroups_2024-Update
Brara.H01664.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Glyma.05G158200	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.17G089300	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
HORVU2Hr1G119160.3	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
PSME_00020524-RA	No alias	(at5g62940 : 135.0) HCA2 induces the formation of...	0.05	Orthogroups_2024-Update
PSME_00041316-RA	No alias	(at5g39660 : 139.0) Dof-type zinc finger...	0.04	Orthogroups_2024-Update
PSME_00052342-RA	No alias	(at5g62940 : 135.0) HCA2 induces the formation of...	0.04	Orthogroups_2024-Update
PSME_00056872-RA	No alias	(at5g60200 : 116.0) Encodes a Dof-type transcription...	0.04	Orthogroups_2024-Update
Potri.004G046600	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Potri.007G038100	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Solyc02g090310	No alias	Dof zinc finger protein (AHRD V3.3 - W9QGW0_9ROSA)	0.03	Orthogroups_2024-Update
Sopen03g032010	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen06g027770	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen11g030150	No alias	Dof domain, zinc finger	0.07	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004097	catechol oxidase activity	IEP	Predicted GO
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Predicted GO
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Predicted GO
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predicted GO
MF	GO:0042393	histone binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	28	84

External Links

No external refs found!

Solyc02g065290

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation