Description : Glycosyl hydrolases family 28
Gene families : OG_42_0002044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002044_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Sopen05g001060 | |
Cluster | HCCA clusters: Cluster_284 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.F00711.1 | No alias | polygalacturonase *(PGX1-like) & EC_3.2 glycosylase | 0.02 | Orthogroups_2024-Update | |
Glyma.01G027900 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
PSME_00014400-RA | No alias | (at1g10640 : 150.0) Pectin lyase-like superfamily... | 0.02 | Orthogroups_2024-Update | |
Potri.001G346800 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Seita.5G239100.1 | No alias | polygalacturonase *(PGX1-like) & EC_3.2 glycosylase | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | IEA | InterProScan predictions |
BP | GO:0005975 | carbohydrate metabolic process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000743 | Glyco_hydro_28 | 104 | 424 |
No external refs found! |