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  5. Sopen05g001130

Sopen05g001130


Description : F-box associated


Gene families : OG_42_0000102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g001130
Cluster HCCA clusters: Cluster_402

Target Alias Description ECC score Gene Family Method Actions
A4A49_13045 No alias f-box protein cpr30 0.02 Orthogroups_2024-Update
A4A49_14296 No alias f-boxkelch-repeat protein 0.03 Orthogroups_2024-Update
At3g06240 No alias F-box/kelch-repeat protein At3g06240... 0.03 Orthogroups_2024-Update
At3g23880 No alias F-box/kelch-repeat protein At3g23880... 0.04 Orthogroups_2024-Update
Brara.B02669.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.C03146.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.08G352900 No alias F-box family protein 0.03 Orthogroups_2024-Update
Glyma.15G101700 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Glyma.18G167700 No alias F-box and associated interaction domains-containing protein 0.02 Orthogroups_2024-Update
Potri.010G207400 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Potri.014G162600 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Potri.016G012700 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Sobic.002G186400.4 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc09g091710 No alias F-box associated interaction domain-containing protein... 0.04 Orthogroups_2024-Update
Solyc10g008450 No alias F-box associated interaction domain-containing protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001810 F-box_dom 40 80
IPR006527 F-box-assoc_dom_typ1 241 349
No external refs found!