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Sopen05g002020


Description : POT family


Gene families : OG_42_0000961 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000961_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g002020
Cluster HCCA clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G138200 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Potri.018G040800 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G041400 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Solyc03g120560 No alias Major facilitator superfamily protein (AHRD V3.3 *** AT1G52190.1) 0.05 Orthogroups_2024-Update
Solyc05g005910 No alias Major facilitator superfamily protein (AHRD V3.3 *** AT1G52190.1) 0.02 Orthogroups_2024-Update
Solyc08g066940 No alias Major facilitator superfamily protein (AHRD V3.3 *** AT1G52190.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000109 POT_fam 92 524
No external refs found!