Sopen05g002190


Description : Histone acetylation protein


Gene families : OG_42_0007662 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007662_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g002190
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
93050 No alias RNI-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g44767 No alias RNI-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G110289 No alias RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G029800 No alias RNI-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU7Hr1G039610.2 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00009381-RA No alias (at1g10510 : 315.0) embryo defective 2004 (emb2004);... 0.02 Orthogroups_2024-Update
Seita.4G105000.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Sobic.010G098200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc05g006170 No alias Lycopersicon esculentum Chloroplast Envelope Protein 1 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
BP GO:0016573 histone acetylation IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013178 Histone_AcTrfase_Rtt109/CBP 41 254
IPR001611 Leu-rich_rpt 797 816
IPR001611 Leu-rich_rpt 736 758
IPR001611 Leu-rich_rpt 822 844
IPR001611 Leu-rich_rpt 680 702
IPR001611 Leu-rich_rpt 935 957
IPR001611 Leu-rich_rpt 905 928
IPR001611 Leu-rich_rpt 652 674
IPR001611 Leu-rich_rpt 850 872
IPR001611 Leu-rich_rpt 627 647
No external refs found!