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  5. Sopen05g002300

Sopen05g002300


Description : WD domain, G-beta repeat


Gene families : OG_42_0000343 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g002300
Cluster HCCA clusters: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
A4A49_10334 No alias compass-like h3k4 histone methylase component wdr5a 0.03 Orthogroups_2024-Update
MA_10429180g0010 No alias (at1g24130 : 233.0) Transducin/WD40 repeat-like... 0.03 Orthogroups_2024-Update
Pp1s110_33V6 No alias No description available 0.02 Orthogroups_2024-Update
Pp1s39_313V6 No alias No description available 0.04 Orthogroups_2024-Update
Solyc04g005020 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 187 217
IPR001680 WD40_repeat 228 260
IPR001680 WD40_repeat 272 306
IPR001680 WD40_repeat 359 409
IPR001680 WD40_repeat 320 350
No external refs found!