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  5. Solyc02g065540

Solyc02g065540


Description : RING/U-box superfamily protein (AHRD V3.3 *** A0A061DGI8_THECC)


Gene families : OG_42_0000548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g065540
Cluster HCCA clusters: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
At4g03510 No alias E3 ubiquitin-protein ligase RMA1... 0.04 Orthogroups_2024-Update
Bradi3g21661 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g16540 No alias RING membrane-anchor 1 0.02 Orthogroups_2024-Update
GRMZM2G400268 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!