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  5. Sopen05g003170

Sopen05g003170


Description : Helix-loop-helix DNA-binding domain


Gene families : OG_42_0001251 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001251_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g003170
Cluster HCCA clusters: Cluster_404

Target Alias Description ECC score Gene Family Method Actions
At5g15160 No alias Transcription factor PRE2... 0.03 Orthogroups_2024-Update
Brara.C00652.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G035156 No alias BANQUO 3 0.02 Orthogroups_2024-Update
Glyma.08G298700 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os06g12210 No alias helix-loop-helix DNA-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
Sopen02g032580 No alias Helix-loop-helix DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 13 54
No external refs found!