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  5. Sopen05g003300

Sopen05g003300


Description : TCP family transcription factor


Gene families : OG_42_0000261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g003300
Cluster HCCA clusters: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
Brara.I00271.1 No alias circadian clock activation factor *(TCP20) & TCP-type... 0.02 Orthogroups_2024-Update
Glyma.16G053900 No alias TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family... 0.02 Orthogroups_2024-Update
HORVU5Hr1G117990.1 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os04g11830 No alias TCP family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g43160 No alias TCP family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
Pp1s446_21V6 No alias T6C23.11; TCP family transcription factor, putative... 0.02 Orthogroups_2024-Update
Seita.1G246200.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.03 Orthogroups_2024-Update
Sobic.004G225400.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.02 Orthogroups_2024-Update
Solyc03g116320 No alias TCP transcription factor 16 0.04 Orthogroups_2024-Update
Solyc06g065190 No alias TCP transcription factor 13 0.03 Orthogroups_2024-Update
Solyc06g070900 No alias TCP transcription factor 17 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 35 195
No external refs found!