Sopen05g003330

Description : Origin recognition complex subunit 6 (ORC6)

Gene families : OG_42_0004419 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004419_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen05g003330
Cluster	HCCA clusters: Cluster_100

Target	Alias	Description	ECC score	Gene Family Method
A4A49_26034	No alias	origin of replication complex subunit 6	0.03	Orthogroups_2024-Update
Cre06.g285650	No alias	origin recognition complex protein 6	0.06	Orthogroups_2024-Update
Glyma.02G106600	No alias	origin recognition complex protein 6	0.04	Orthogroups_2024-Update
MA_112539g0010	No alias	(at1g26840 : 306.0) Origin Recognition Complex subunit...	0.03	Orthogroups_2024-Update
Mp8g00870.1	No alias	component ORC6 of origin recognition complex	0.02	Orthogroups_2024-Update
PSME_00017259-RA	No alias	(at1g26840 : 315.0) Origin Recognition Complex subunit...	0.04	Orthogroups_2024-Update
Solyc05g007450	No alias	Origin recognition complex, subunit 6 (AHRD V3.3 ***...	0.23	Orthogroups_2024-Update
evm.model.tig00001041.20	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0000808	origin recognition complex	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005664	nuclear origin of replication recognition complex	IEA	InterProScan predictions
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	InterProScan predictions
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044427	chromosomal part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044454	nuclear chromosome part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR008721	ORC6	3	91

External Links

No external refs found!

Sopen05g003330

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation