Sopen05g003390

Description : RNA dependent RNA polymerase

Gene families : OG_42_0002271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002271_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen05g003390
Cluster	HCCA clusters: Cluster_162

Target	Alias	Description	ECC score	Gene Family Method
150191	No alias	RNA-dependent RNA polymerase 1	0.02	Orthogroups_2024-Update
At1g14790	No alias	RNA-dependent RNA polymerase...	0.03	Orthogroups_2024-Update
Bradi3g59910	No alias	RNA-dependent RNA polymerase 1	0.02	Orthogroups_2024-Update
Seita.7G128700.1	No alias	RNA polymerase-IV-dependent siRNA polymerase *(RDR2)	0.03	Orthogroups_2024-Update
Solyc05g007510	No alias	RNA-directed RNA polymerase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
MF	GO:0034062	5'-3' RNA polymerase activity	None	Extended
MF	GO:0097747	RNA polymerase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007855	RNA-dep_RNA_pol_euk-typ	362	935

External Links

No external refs found!