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  5. Solyc02g065600

Solyc02g065600


Description : Trichome birefringence-like 19 (AHRD V3.3 *** A0A061EH35_THECC)


Gene families : OG_42_0000195 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g065600
Cluster HCCA clusters: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
At3g02440 No alias TRICHOME BIREFRINGENCE-LIKE 20... 0.04 Orthogroups_2024-Update
Brara.G02444.1 No alias xyloglucan O-acetyltransferase *(AXY4) 0.03 Orthogroups_2024-Update
Brara.I00067.1 No alias mannan O-acetyltransferase *(MOAT) 0.02 Orthogroups_2024-Update
GRMZM2G122073 No alias TRICHOME BIREFRINGENCE-LIKE 27 0.02 Orthogroups_2024-Update
Glyma.13G230100 No alias TRICHOME BIREFRINGENCE-LIKE 21 0.05 Orthogroups_2024-Update
Glyma.19G041600 No alias TRICHOME BIREFRINGENCE-LIKE 19 0.02 Orthogroups_2024-Update
Pp1s2_52V6 No alias F2N1.14; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Solyc02g087120 No alias Trichome birefringence-like 22, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen02g034390 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 74 126
IPR026057 PC-Esterase 127 415
No external refs found!