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  5. Sopen05g003750

Sopen05g003750


Description : Ring finger domain


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g003750
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
A4A49_24130 No alias e3 ubiquitin-protein ligase ring1-like protein 0.04 Orthogroups_2024-Update
A4A49_41488 No alias e3 ubiquitin-protein ligase rduf1 0.03 Orthogroups_2024-Update
At1g26800 No alias E3 ubiquitin-protein ligase MPSR1... 0.05 Orthogroups_2024-Update
At3g30460 No alias RING/U-box superfamily protein... 0.04 Orthogroups_2024-Update
Bradi1g35540 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.B00623.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C03763.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Glyma.10G244900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G072800 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os11g37230 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
Mp7g04520.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Potri.005G062400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G032100 No alias RING-H2 finger C1A 0.03 Orthogroups_2024-Update
Potri.008G087200 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Seita.2G401300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.7G303700.1 No alias gibberellin modification enzyme *(ELA) & EC_1.14... 0.02 Orthogroups_2024-Update
Seita.8G172700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G403200.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc05g007900 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.05 Orthogroups_2024-Update
Solyc12g008480 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT1G60360.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 106 148
No external refs found!