Sopen05g003890


Description : Homeobox domain


Gene families : OG_42_0000184 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g003890
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
At2g44910 No alias Uncharacterized protein At2g44910 (Fragment)... 0.02 Orthogroups_2024-Update
Glyma.19G149000 No alias homeobox from Arabidopsis thaliana 0.03 Orthogroups_2024-Update
PSME_00006756-RA No alias (at5g06710 : 209.0) Homeobox-leucine zipper protein.;... 0.03 Orthogroups_2024-Update
Sobic.001G278800.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001356 Homeobox_dom 64 118
IPR003106 Leu_zip_homeo 120 154
No external refs found!