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  5. Sopen05g004170

Sopen05g004170


Description : Core-2/I-Branching enzyme


Gene families : OG_42_0000216 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000216_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g004170
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Brara.A03814.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G018869 No alias Core-2/I-branching... 0.01 Orthogroups_2024-Update
Glyma.06G222700 No alias Core-2/I-branching... 0.02 Orthogroups_2024-Update
LOC_Os01g03160 No alias xylosyltransferase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g23580 No alias xylosyltransferase, putative, expressed 0.02 Orthogroups_2024-Update
Seita.9G132600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc12g006490 No alias Core-2/I-branching... 0.05 Orthogroups_2024-Update
evm.model.contig_4416.1 No alias (at3g15350 : 82.4) Core-2/I-branching... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008375 acetylglucosaminyltransferase activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 56 303
No external refs found!