Sopen05g005060

Description : CCT motif

Gene families : OG_42_0000843 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000843_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen05g005060
Cluster	HCCA clusters: Cluster_125

Target	Alias	Description	ECC score	Gene Family Method
Glyma.10G274300	No alias	B-box type zinc finger protein with CCT domain	0.03	Orthogroups_2024-Update
Glyma.20G115600	No alias	B-box type zinc finger protein with CCT domain	0.02	Orthogroups_2024-Update
Pp1s3_491V6	No alias	No description available	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000315	Znf_B-box	17	59
IPR010402	CCT_domain	378	420

External Links

No external refs found!