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  5. Sopen05g007210

Sopen05g007210


Description : Pentatricopeptide repeat domain


Gene families : OG_42_0006969 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006969_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g007210
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
At1g26460 No alias Pentatricopeptide repeat-containing protein At1g26460,... 0.04 Orthogroups_2024-Update
Glyma.01G058200 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G159100 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Sobic.002G364900.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc05g012390 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 492 538
No external refs found!