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  5. Sopen05g007460

Sopen05g007460


Description : PPR repeat


Gene families : OG_42_0011257 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011257_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g007460
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Brara.G02867.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.008G093000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 134 159
IPR002885 Pentatricopeptide_repeat 162 191
IPR002885 Pentatricopeptide_repeat 263 291
IPR002885 Pentatricopeptide_repeat 566 596
IPR002885 Pentatricopeptide_repeat 61 87
IPR002885 Pentatricopeptide_repeat 437 458
IPR002885 Pentatricopeptide_repeat 538 564
IPR002885 Pentatricopeptide_repeat 463 509
IPR002885 Pentatricopeptide_repeat 364 407
No external refs found!