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  5. Solyc02g066980

Solyc02g066980


Description : LOW QUALITY:TPX2 (targeting protein for Xklp2) protein family (AHRD V3.3 *** AT5G15510.1)


Gene families : OG_42_0001117 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g066980
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
A4A49_19014 No alias protein tpx2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016556 mRNA modification IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0080009 mRNA methylation IEP Predicted GO
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predicted GO
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR027329 TPX2_C 421 477
No external refs found!