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  5. Sopen05g008190

Sopen05g008190


Description : PPR repeat


Gene families : OG_42_0009348 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009348_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g008190
Cluster HCCA clusters: Cluster_348

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G036870.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 714 739
IPR002885 Pentatricopeptide_repeat 196 226
IPR002885 Pentatricopeptide_repeat 122 153
IPR002885 Pentatricopeptide_repeat 339 387
IPR002885 Pentatricopeptide_repeat 819 867
IPR002885 Pentatricopeptide_repeat 269 317
IPR002885 Pentatricopeptide_repeat 750 798
IPR002885 Pentatricopeptide_repeat 897 919
IPR002885 Pentatricopeptide_repeat 236 265
IPR002885 Pentatricopeptide_repeat 442 471
IPR002885 Pentatricopeptide_repeat 511 540
IPR002885 Pentatricopeptide_repeat 476 504
No external refs found!