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  5. Sopen05g008450

Sopen05g008450


Description : AP2 domain


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g008450
Cluster HCCA clusters: Cluster_391

Target Alias Description ECC score Gene Family Method Actions
Brara.A00880.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.C03783.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.D02719.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.J02528.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G016434 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G147600 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.16G047600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G147500 No alias Integrase-type DNA-binding superfamily protein 0.07 Orthogroups_2024-Update
MA_33394g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Mp2g11080.1 No alias transcription factor (ERF) 0.03 Orthogroups_2024-Update
Potri.002G167400 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
Potri.005G087200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G238600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s38_257V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s67_144V6 No alias ap2 domain transcription factor 0.02 Orthogroups_2024-Update
Seita.8G098100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G170100.1 No alias subgroup ERF-III transcription factor 0.06 Orthogroups_2024-Update
Solyc03g006320 No alias Ethylene-responsive transcription factor, putative (AHRD... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 50 99
No external refs found!