Sopen05g008800

Description : Sieve element occlusion N-terminus

Gene families : OG_42_0001319 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001319_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen05g008800
Cluster	HCCA clusters: Cluster_386

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03528	No alias	protein sieve element occlusion b	0.09	Orthogroups_2024-Update
A4A49_20366	No alias	protein sieve element occlusion b	0.09	Orthogroups_2024-Update
A4A49_33052	No alias	protein sieve element occlusion b	0.09	Orthogroups_2024-Update
Brara.A03945.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Brara.C02934.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Brara.E03638.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Potri.001G340200	No alias	Function unknown	0.06	Orthogroups_2024-Update
Potri.010G050600	No alias	Function unknown	0.04	Orthogroups_2024-Update
Potri.012G090400	No alias	Function unknown	0.04	Orthogroups_2024-Update
Solyc05g013850	No alias	Sieve element occlusion c (AHRD V3.3 *** E2FKK0_9SOLN)	0.05	Orthogroups_2024-Update
Solyc05g013860	No alias	sieve element occlusion protein (AHRD V3.3 *** AT1G67790.1)	0.03	Orthogroups_2024-Update
Solyc05g013870	No alias	Sieve element occlusion c (AHRD V3.3 *** E2FKK0_9SOLN)	0.05	Orthogroups_2024-Update
Sopen04g013790	No alias	Sieve element occlusion N-terminus	0.03	Orthogroups_2024-Update
Sopen05g008790	No alias	Sieve element occlusion N-terminus	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR027944	SEO_C	555	786
IPR027942	SEO_N	98	387

External Links

No external refs found!