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  5. Sopen05g009570

Sopen05g009570


Description : PPR repeat family


Gene families : OG_42_0004009 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004009_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g009570
Cluster HCCA clusters: Cluster_290

Target Alias Description ECC score Gene Family Method Actions
Bradi1g08840 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os03g53490 No alias PPR repeat containing protein, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 298 357
IPR002885 Pentatricopeptide_repeat 369 427
IPR002885 Pentatricopeptide_repeat 239 288
IPR002885 Pentatricopeptide_repeat 209 234
IPR002885 Pentatricopeptide_repeat 144 166
IPR002885 Pentatricopeptide_repeat 457 484
No external refs found!