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  5. Sopen05g009950

Sopen05g009950


Description : Lipoxygenase


Gene families : OG_42_0000116 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g009950
Cluster HCCA clusters: Cluster_357

Target Alias Description ECC score Gene Family Method Actions
109226 No alias lipoxygenase 1 0.01 Orthogroups_2024-Update
140773 No alias lipoxygenase 3 0.02 Orthogroups_2024-Update
Bradi3g07000 No alias lipoxygenase 2 0.02 Orthogroups_2024-Update
Bradi5g11590 No alias lipoxygenase 3 0.03 Orthogroups_2024-Update
Brara.B01571.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
Brara.B01730.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.02 Orthogroups_2024-Update
Brara.B02031.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
GRMZM2G109130 No alias lipoxygenase 1 0.02 Orthogroups_2024-Update
Glyma.11G130300 No alias lipoxygenase 2 0.04 Orthogroups_2024-Update
LOC_Os02g10120 No alias lipoxygenase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g39840 No alias lipoxygenase, chloroplast precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_153g0020 No alias (at1g17420 : 739.0) Lipoxygenase; lipoxygenase 3 (LOX3);... 0.02 Orthogroups_2024-Update
Mp2g16000.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.02 Orthogroups_2024-Update
PSME_00002206-RA No alias (p37831|lox1_soltu : 871.0) Lipoxygenase 1 (EC... 0.03 Orthogroups_2024-Update
PSME_00003701-RA No alias (at1g55020 : 1024.0) lipoxygenase, a defense gene... 0.03 Orthogroups_2024-Update
PSME_00006851-RA No alias (p37831|lox1_soltu : 962.0) Lipoxygenase 1 (EC... 0.03 Orthogroups_2024-Update
PSME_00017953-RA No alias (p37831|lox1_soltu : 1048.0) Lipoxygenase 1 (EC... 0.03 Orthogroups_2024-Update
PSME_00018807-RA No alias (at1g55020 : 1015.0) lipoxygenase, a defense gene... 0.02 Orthogroups_2024-Update
Pp1s419_10V6 No alias lipoxygenase 0.02 Orthogroups_2024-Update
Pp1s70_182V6 No alias lipoxygenase 0.02 Orthogroups_2024-Update
Seita.1G050700.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
Seita.9G127700.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.04 Orthogroups_2024-Update
Sobic.001G125800.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
Sobic.006G248300.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
Solyc01g009680 No alias Lipoxygenase (AHRD V3.3 *** K4ATG3_SOLLC) 0.03 Orthogroups_2024-Update
Solyc05g014790 No alias Lipoxygenase (AHRD V3.3 *** A0A0V0IV84_SOLCH) 0.05 Orthogroups_2024-Update
Solyc09g075860 No alias Lipoxygenase (AHRD V3.3 *** A0A0V0IV70_SOLCH) 0.06 Orthogroups_2024-Update
Sopen01g002550 No alias Lipoxygenase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013819 LipOase_C 122 789
IPR001024 PLAT/LH2_dom 16 108
No external refs found!