Sopen05g011020

Description : Reverse transcriptase (RNA-dependent DNA polymerase)

Gene families : OG_42_0000008 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen05g011020
Cluster	HCCA clusters: Cluster_60

Target	Alias	Description	ECC score	Gene Family Method
Brara.D01170.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Cre03.g183950	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	0.02	Orthogroups_2024-Update
LOC_Os08g30360	No alias	retrotransposon protein, putative, Ty1-copia subclass	0.04	Orthogroups_2024-Update
Solyc07g009390	No alias	No description available	0.03	Orthogroups_2024-Update
Sopen01g011400	No alias	Reverse transcriptase (RNA-dependent DNA polymerase)	0.03	Orthogroups_2024-Update
Sopen01g012650	No alias	Reverse transcriptase (RNA-dependent DNA polymerase)	0.03	Orthogroups_2024-Update
Sopen03g020190	No alias	Reverse transcriptase (RNA-dependent DNA polymerase)	0.03	Orthogroups_2024-Update
Sopen03g021340	No alias	gag-polypeptide of LTR copia-type	0.03	Orthogroups_2024-Update
Sopen04g031680	No alias	Reverse transcriptase (RNA-dependent DNA polymerase)	0.03	Orthogroups_2024-Update
Sopen11g014180	No alias	Reverse transcriptase (RNA-dependent DNA polymerase)	0.03	Orthogroups_2024-Update
Sopen11g022040	No alias	Reverse transcriptase (RNA-dependent DNA polymerase)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013103	RVT_2	130	210
IPR013103	RVT_2	74	126

External Links

No external refs found!