Description : Integrase core domain
Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Sopen05g011340 | |
Cluster | HCCA clusters: Cluster_361 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
HORVU0Hr1G011670.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
LOC_Os06g19350 | No alias | retrotransposon, putative, centromere-specific, expressed | 0.02 | Orthogroups_2024-Update | |
Solyc08g044450 | No alias | No description available | 0.03 | Orthogroups_2024-Update | |
Solyc08g061440 | No alias | No description available | 0.04 | Orthogroups_2024-Update | |
Solyc09g059000 | No alias | No description available | 0.03 | Orthogroups_2024-Update | |
Solyc12g038850 | No alias | No description available | 0.03 | Orthogroups_2024-Update | |
Sopen01g008200 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.02 | Orthogroups_2024-Update | |
Sopen01g022180 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
Sopen02g012390 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
Sopen03g035450 | No alias | Retroviral aspartyl protease | 0.03 | Orthogroups_2024-Update | |
Sopen04g010080 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
Sopen04g030350 | No alias | Rhamnogalacturonate lyase family | 0.03 | Orthogroups_2024-Update | |
Sopen05g026780 | No alias | Integrase core domain | 0.03 | Orthogroups_2024-Update | |
Sopen07g005780 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.04 | Orthogroups_2024-Update | |
Sopen11g022600 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
Sopen11g022720 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
Sopen12g027580 | No alias | Chromo (CHRromatin Organisation MOdifier) domain | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0015074 | DNA integration | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |