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  5. Sopen05g014700

Sopen05g014700


Description : Ring finger domain


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g014700
Cluster HCCA clusters: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
A4A49_21563 No alias e3 ubiquitin-protein ligase ring1 0.03 Orthogroups_2024-Update
At1g26800 No alias E3 ubiquitin-protein ligase MPSR1... 0.02 Orthogroups_2024-Update
At3g30460 No alias RING/U-box superfamily protein... 0.03 Orthogroups_2024-Update
Bradi3g34010 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.C00961.1 No alias signal transducer of abscisic acid perception *(AIP2) 0.03 Orthogroups_2024-Update
Brara.C00964.1 No alias signal transducer of abscisic acid perception *(AIP2) 0.03 Orthogroups_2024-Update
Brara.C02094.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.C03763.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Glyma.16G213500 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G043120.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os12g04450 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.7G303700.1 No alias gibberellin modification enzyme *(ELA) & EC_1.14... 0.02 Orthogroups_2024-Update
Solyc02g082890 No alias LOW QUALITY:RING/U-box superfamily protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
evm.model.contig_3394.2 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
evm.model.contig_4448.17 No alias (at3g19950 : 129.0) RING/U-box superfamily protein;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 46 87
No external refs found!